Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AF013593.1-201ENST00000458074 1487 ntBASIC15.77■□□□□ 0.11
CIITAP33076 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CIITAP33076 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CIITAP33076 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CIITAP33076 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CIITAP33076 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CIITAP33076 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 GGTLC4P-201ENST00000402176 664 ntBASIC15.76■□□□□ 0.11
CIITAP33076 OR2W2P-201ENST00000406313 909 ntBASIC15.76■□□□□ 0.11
CIITAP33076 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.76■□□□□ 0.11
CIITAP33076 RPSAP31-201ENST00000416648 895 ntBASIC15.76■□□□□ 0.11
CIITAP33076 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.76■□□□□ 0.11
CIITAP33076 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 RPL7P35-201ENST00000446943 740 ntBASIC15.76■□□□□ 0.11
CIITAP33076 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.76■□□□□ 0.11
CIITAP33076 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.76■□□□□ 0.11
CIITAP33076 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.76■□□□□ 0.11
CIITAP33076 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.76■□□□□ 0.11
CIITAP33076 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 NPM1P43-201ENST00000558669 786 ntBASIC15.76■□□□□ 0.11
CIITAP33076 AC135983.4-201ENST00000564116 1262 ntBASIC15.76■□□□□ 0.11
CIITAP33076 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.76■□□□□ 0.11
CIITAP33076 MIR3180-2-201ENST00000581748 88 ntBASIC15.76■□□□□ 0.11
CIITAP33076 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.76■□□□□ 0.11
CIITAP33076 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 AP000322.3-201ENST00000608665 388 ntBASIC15.76■□□□□ 0.11
CIITAP33076 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CIITAP33076 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CIITAP33076 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CIITAP33076 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.75■□□□□ 0.11
CIITAP33076 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 MIR1307-201ENST00000408840 149 ntBASIC15.75■□□□□ 0.11
CIITAP33076 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.75■□□□□ 0.11
CIITAP33076 RN7SKP109-201ENST00000410592 316 ntBASIC15.75■□□□□ 0.11
CIITAP33076 DPY19L2P5-201ENST00000456300 331 ntBASIC15.75■□□□□ 0.11
CIITAP33076 RPS2P36-201ENST00000456516 831 ntBASIC15.75■□□□□ 0.11
CIITAP33076 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.75■□□□□ 0.11
CIITAP33076 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.75■□□□□ 0.11
CIITAP33076 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CIITAP33076 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.75■□□□□ 0.11
CIITAP33076 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CIITAP33076 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.75■□□□□ 0.11
CIITAP33076 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.75■□□□□ 0.11
CIITAP33076 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.75■□□□□ 0.11
CIITAP33076 MIR4722-201ENST00000578292 60 ntBASIC15.75■□□□□ 0.11
CIITAP33076 NUDT4P2-201ENST00000578341 546 ntBASIC15.75■□□□□ 0.11
CIITAP33076 MIR3940-201ENST00000579148 102 ntBASIC15.75■□□□□ 0.11
CIITAP33076 RN7SL190P-201ENST00000582519 257 ntBASIC15.75■□□□□ 0.11
CIITAP33076 RN7SL470P-201ENST00000583069 259 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms