Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
RAB3BP20337 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB3BP20337 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.42□□□□□ -0.42
RAB3BP20337 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.42□□□□□ -0.42
RAB3BP20337 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
RAB3BP20337 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.42□□□□□ -0.42
RAB3BP20337 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.42□□□□□ -0.42
RAB3BP20337 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.42□□□□□ -0.42
RAB3BP20337 AC021016.3-201ENST00000608367 477 ntBASIC12.42□□□□□ -0.42
RAB3BP20337 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB3BP20337 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RAB3BP20337 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 AC022497.1-201ENST00000624916 3691 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 LAP3P2-201ENST00000454686 1454 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB3BP20337 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
RAB3BP20337 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 SNORA50C-201ENST00000408535 133 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB3BP20337 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 AC004967.1-201ENST00000453589 447 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB3BP20337 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB3BP20337 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 AL512310.5-201ENST00000551999 515 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB3BP20337 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 AC106820.3-201ENST00000561653 397 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB3BP20337 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.41□□□□□ -0.42
RAB3BP20337 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 AC145423.3-201ENST00000615987 467 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RAB3BP20337 SNORA50.1-201ENST00000628590 135 ntBASIC12.41□□□□□ -0.42
RAB3BP20337 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
RAB3BP20337 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB3BP20337 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
RAB3BP20337 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB3BP20337 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
RAB3BP20337 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB3BP20337 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB3BP20337 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RAB3BP20337 LINC00638-201ENST00000555578 2518 ntBASIC12.4□□□□□ -0.42
RAB3BP20337 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms