Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.03□□□□□ -0.32
THBS1P07996 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.03□□□□□ -0.32
THBS1P07996 AC093752.3-201ENST00000567343 901 ntBASIC13.03□□□□□ -0.32
THBS1P07996 AC104982.3-201ENST00000581995 514 ntBASIC13.03□□□□□ -0.32
THBS1P07996 MIR3188-201ENST00000583494 85 ntBASIC13.03□□□□□ -0.32
THBS1P07996 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
THBS1P07996 AL157813.1-201ENST00000612996 587 ntBASIC13.03□□□□□ -0.32
THBS1P07996 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.03□□□□□ -0.32
THBS1P07996 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.03□□□□□ -0.32
THBS1P07996 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
THBS1P07996 AL358781.1-202ENST00000321081 1360 ntBASIC13.03□□□□□ -0.32
THBS1P07996 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
THBS1P07996 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.03□□□□□ -0.32
THBS1P07996 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
THBS1P07996 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.03□□□□□ -0.32
THBS1P07996 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
THBS1P07996 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.03□□□□□ -0.32
THBS1P07996 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
THBS1P07996 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
THBS1P07996 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 AGAP12P-201ENST00000585227 2359 ntBASIC13.02□□□□□ -0.32
THBS1P07996 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.02□□□□□ -0.32
THBS1P07996 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
THBS1P07996 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
THBS1P07996 AC020917.4-201ENST00000623994 1999 ntBASIC13.02□□□□□ -0.32
THBS1P07996 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.02□□□□□ -0.33
THBS1P07996 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.02□□□□□ -0.33
THBS1P07996 AC104073.2-201ENST00000453737 312 ntBASIC13.02□□□□□ -0.33
THBS1P07996 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 RN7SL277P-201ENST00000481521 288 ntBASIC13.02□□□□□ -0.33
THBS1P07996 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC13.02□□□□□ -0.33
THBS1P07996 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.02□□□□□ -0.33
THBS1P07996 AC013355.1-201ENST00000562625 723 ntBASIC13.02□□□□□ -0.33
THBS1P07996 AC243960.2-201ENST00000600996 747 ntBASIC13.02□□□□□ -0.33
THBS1P07996 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 DMBT1P1-203ENST00000636837 4628 ntBASIC13.02□□□□□ -0.33
THBS1P07996 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 AC008620.2-201ENST00000510294 1569 ntBASIC13.02□□□□□ -0.33
THBS1P07996 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.02□□□□□ -0.33
THBS1P07996 FMO6P-201ENST00000236166 1620 ntBASIC13.02□□□□□ -0.33
THBS1P07996 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.02□□□□□ -0.33
THBS1P07996 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
THBS1P07996 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
THBS1P07996 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.01□□□□□ -0.33
THBS1P07996 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
THBS1P07996 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.01□□□□□ -0.33
THBS1P07996 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.01□□□□□ -0.33
THBS1P07996 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.01□□□□□ -0.33
THBS1P07996 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
THBS1P07996 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
THBS1P07996 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms