Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 SNORA30.1-201ENST00000363193 129 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 MARCKSL1P2-201ENST00000401037 976 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 MIR1226-201ENST00000408658 75 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 WDR54-202ENST00000409791 854 ntTSL 3 BASIC17.91■□□□□ 0.46
COL5A2P05997 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC17.91■□□□□ 0.46
COL5A2P05997 RN7SL47P-201ENST00000488710 299 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 AC005332.2-201ENST00000590010 930 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 AL078624.1-201ENST00000604004 547 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 AL031768.1-201ENST00000606542 701 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 AC092535.4-201ENST00000609548 397 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 AC148476.1-201ENST00000622182 705 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 AC011239.2-201ENST00000624820 1489 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.91■□□□□ 0.46
COL5A2P05997 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
COL5A2P05997 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.91■□□□□ 0.46
COL5A2P05997 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.91■□□□□ 0.46
COL5A2P05997 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.91■□□□□ 0.46
COL5A2P05997 AL157832.2-205ENST00000597245 1649 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL5A2P05997 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 AC140479.7-201ENST00000636301 2332 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 AL031577.1-201ENST00000339867 399 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC17.9■□□□□ 0.46
COL5A2P05997 NOS2P3-201ENST00000411468 867 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC17.9■□□□□ 0.46
COL5A2P05997 NOS2P2-201ENST00000426269 867 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 RN7SL33P-201ENST00000462543 342 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC17.9■□□□□ 0.46
COL5A2P05997 AC022001.3-201ENST00000606330 596 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 Z82244.1-201ENST00000631502 840 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.9■□□□□ 0.46
COL5A2P05997 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 AC097474.1-201ENST00000506481 1371 ntBASIC17.9■□□□□ 0.46
COL5A2P05997 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
COL5A2P05997 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL5A2P05997 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COL5A2P05997 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 RN7SKP255-201ENST00000363442 313 ntBASIC17.89■□□□□ 0.45
COL5A2P05997 RN7SKP203-201ENST00000363618 332 ntBASIC17.89■□□□□ 0.45
COL5A2P05997 RN7SKP71-201ENST00000364558 318 ntBASIC17.89■□□□□ 0.45
COL5A2P05997 7SK.1-201ENST00000365328 331 ntBASIC17.89■□□□□ 0.45
COL5A2P05997 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC17.89■□□□□ 0.45
COL5A2P05997 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC17.89■□□□□ 0.45
COL5A2P05997 RPL3P9-201ENST00000463217 1183 ntBASIC17.89■□□□□ 0.45
COL5A2P05997 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC17.89■□□□□ 0.45
COL5A2P05997 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL5A2P05997 AC244097.1-201ENST00000621631 1216 ntBASIC17.89■□□□□ 0.45
COL5A2P05997 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC17.89■□□□□ 0.45
COL5A2P05997 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.89■□□□□ 0.45
COL5A2P05997 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
COL5A2P05997 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
COL5A2P05997 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.89■□□□□ 0.45
COL5A2P05997 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.89■□□□□ 0.45
COL5A2P05997 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL5A2P05997 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms