Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MIR4649-201ENST00000582839 64 ntBASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AL354861.1-201ENST00000445213 355 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AC079112.1-201ENST00000454972 939 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 RN7SL564P-201ENST00000496309 250 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 KRT18P8-201ENST00000581937 1246 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AC073911.3-201ENST00000624401 631 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AC111170.3-201ENST00000624282 2464 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AL139158.3-201ENST00000641212 1562 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 IL9RP3-201ENST00000442856 1674 ntBASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20BQ9P0W2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 RN7SKP109-201ENST00000410592 316 ntBASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 RN7SL8P-201ENST00000461771 266 ntBASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 MIR4265-201ENST00000582152 99 ntBASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 TBC1D27-202ENST00000424239 1573 ntBASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HMG20BQ9P0W2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms