Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 AC092115.1-201ENST00000566277 1402 ntBASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 PCDHA3-202ENST00000532566 4594 ntBASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 AC099063.4-201ENST00000641099 1602 ntBASIC15.32■□□□□ 0.04
TRMT13Q9NUP7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 CDCA4P4-201ENST00000435216 680 ntBASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 TBC1D3P6-201ENST00000505954 962 ntBASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 SALL4P6-201ENST00000429385 1691 ntBASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRMT13Q9NUP7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 LINC02486-201ENST00000604157 3000 ntBASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 SIRPB3P-201ENST00000340424 1216 ntBASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AC005722.1-201ENST00000431878 964 ntBASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AL590235.1-201ENST00000564650 861 ntBASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AC018846.1-201ENST00000568231 183 ntBASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRMT13Q9NUP7 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms