Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AL021707.6-201ENST00000609212 491 ntBASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AC015909.3-201ENST00000572855 1794 ntBASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 TUBB1P2-201ENST00000422712 1306 ntBASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 TUBB1P1-201ENST00000503144 1300 ntBASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 PI4KAP2-201ENST00000360806 2080 ntBASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 RN7SL530P-201ENST00000485097 298 ntBASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 AC125604.1-201ENST00000496255 707 ntBASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 AL451050.2-201ENST00000606967 682 ntBASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 AL008638.5-201ENST00000623814 1298 ntBASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.87□□□□□ -0.35
RSPO3Q9BXY4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 ST20-AS1-201ENST00000560255 4223 ntBASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 DLX4-206ENST00000611342 1662 ntBASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 NRADDP-202ENST00000641269 1585 ntBASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 RCC2P5-201ENST00000492126 1487 ntBASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.86□□□□□ -0.35
RSPO3Q9BXY4 BX679664.3-201ENST00000414070 555 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms