Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 TBC1D27-202ENST00000424239 1573 ntBASIC12.39□□□□□ -0.43
TMEM54Q969K7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 KLF17P1-201ENST00000547105 1126 ntBASIC12.38□□□□□ -0.43
TMEM54Q969K7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AL353770.1-201ENST00000614915 403 ntBASIC12.38□□□□□ -0.43
TMEM54Q969K7 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 FAM90A2P-201ENST00000511144 1395 ntBASIC12.38□□□□□ -0.43
TMEM54Q969K7 FAM90A25P-201ENST00000528404 1395 ntBASIC12.38□□□□□ -0.43
TMEM54Q969K7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 AL365181.3-201ENST00000605886 3222 ntBASIC12.38□□□□□ -0.43
TMEM54Q969K7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM54Q969K7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM54Q969K7 CR383656.2-201ENST00000548656 2254 ntBASIC12.37□□□□□ -0.43
TMEM54Q969K7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 NUP210P1-202ENST00000504322 710 ntBASIC12.37□□□□□ -0.43
TMEM54Q969K7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 AC242376.1-201ENST00000559033 726 ntBASIC12.37□□□□□ -0.43
TMEM54Q969K7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms