Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC131235.2-201ENST00000445553 1057 ntBASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 AC114781.1-201ENST00000450559 1028 ntBASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 RN7SL750P-201ENST00000582814 238 ntBASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 RN7SL827P-201ENST00000607480 288 ntBASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL22A1Q8NFW1 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 SNORA50C-201ENST00000408535 133 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC108082.1-201ENST00000510857 331 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 IGHV3OR16-11-201ENST00000565524 349 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 MFSD12-215ENST00000615613 688 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC020763.2-201ENST00000623155 1255 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 SNORA50.1-201ENST00000628590 135 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC020763.3-201ENST00000625095 2904 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC113367.3-201ENST00000508316 1912 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GAPDHP65-201ENST00000425487 1006 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 RN7SL111P-201ENST00000468841 285 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 MIR4763-201ENST00000581461 92 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 MIR941-1-201ENST00000636396 72 ntBASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL22A1Q8NFW1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
COL22A1Q8NFW1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
COL22A1Q8NFW1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL22A1Q8NFW1 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
COL22A1Q8NFW1 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms