Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 GNAQP1-201ENST00000444815 1067 ntBASIC10.57□□□□□ -0.72
NUP35Q8NFH5 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 MTDHP5-201ENST00000598980 586 ntBASIC10.57□□□□□ -0.72
NUP35Q8NFH5 NME4-212ENST00000621774 904 ntTSL 3 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 AC011700.1-201ENST00000610409 2627 ntBASIC10.57□□□□□ -0.72
NUP35Q8NFH5 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
NUP35Q8NFH5 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 KRT18P15-201ENST00000458108 1291 ntBASIC10.56□□□□□ -0.72
NUP35Q8NFH5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 RN7SL399P-201ENST00000471648 279 ntBASIC10.56□□□□□ -0.72
NUP35Q8NFH5 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 MESTP3-201ENST00000503460 968 ntBASIC10.56□□□□□ -0.72
NUP35Q8NFH5 RARRES2P5-201ENST00000564013 466 ntBASIC10.56□□□□□ -0.72
NUP35Q8NFH5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC10.56□□□□□ -0.72
NUP35Q8NFH5 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms