Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 AL627231.1-201ENST00000394467 1125 ntBASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 AC092506.1-202ENST00000401022 528 ntBASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 FTLP1-201ENST00000449155 526 ntBASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 DUTP3-201ENST00000450025 415 ntBASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 ALG1L13P-202ENST00000519320 584 ntBASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 MARK2P16-201ENST00000605714 1723 ntBASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC097359.2-201ENST00000604992 2389 ntBASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AL807761.2-201ENST00000422849 729 ntBASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC019193.1-201ENST00000506678 823 ntBASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC114947.1-202ENST00000514136 344 ntBASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 PRKXP1-201ENST00000561423 1122 ntBASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 MIR3677-201ENST00000578964 60 ntBASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms