Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FAM187B2P-201ENST00000577135 713 ntBASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 RN7SL605P-201ENST00000577229 281 ntBASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 AL627230.2-201ENST00000613254 655 ntBASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 AC015656.1-201ENST00000624209 3578 ntBASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC097359.2-201ENST00000604992 2389 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC106827.1-201ENST00000366454 431 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC092810.2-201ENST00000431570 362 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC025594.1-201ENST00000469533 543 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC104212.2-201ENST00000478813 628 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 GGNBP1-204ENST00000613113 887 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 AL390755.1-201ENST00000623716 2027 ntBASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.91□□□□□ -0.02
NPAS4Q8IUM7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AC008620.2-201ENST00000510294 1569 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 NRADDP-202ENST00000641269 1585 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AL513477.1-201ENST00000602865 2407 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 NHP2P1-201ENST00000335274 462 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AL357373.1-201ENST00000394974 322 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 BAP1-211ENST00000615113 489 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 AC026120.2-201ENST00000617239 309 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 MME-218ENST00000625667 363 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms