Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AL031595.1-201ENST00000623969 4709 ntBASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 FAM90A2P-201ENST00000511144 1395 ntBASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 FAM90A25P-201ENST00000528404 1395 ntBASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 RTN3P1-201ENST00000536295 711 ntBASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AL512310.5-201ENST00000551999 515 ntBASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AC097724.1-201ENST00000609581 426 ntBASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 AC015909.3-201ENST00000572855 1794 ntBASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TTC39BQ5VTQ0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 KRT18P9-201ENST00000604826 1300 ntBASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 BANF1P3-201ENST00000412556 261 ntBASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 AC116345.2-201ENST00000512837 523 ntBASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 FGFR3P5-201ENST00000564496 886 ntBASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TTC39BQ5VTQ0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms