Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.22■□□□□ 0.51
CCDC27Q2M243 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC27Q2M243 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC27Q2M243 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 AC106827.1-201ENST00000366454 431 ntBASIC18.21■□□□□ 0.51
CCDC27Q2M243 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 AC026316.1-201ENST00000398900 414 ntBASIC18.21■□□□□ 0.51
CCDC27Q2M243 AL627422.1-201ENST00000434104 580 ntBASIC18.21■□□□□ 0.51
CCDC27Q2M243 ERP29P1-201ENST00000442902 706 ntBASIC18.21■□□□□ 0.51
CCDC27Q2M243 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 IGLV3-15-201ENST00000518356 244 ntBASIC18.21■□□□□ 0.51
CCDC27Q2M243 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 AC103810.10-201ENST00000606504 343 ntBASIC18.21■□□□□ 0.51
CCDC27Q2M243 AC084781.1-201ENST00000613737 656 ntBASIC18.21■□□□□ 0.51
CCDC27Q2M243 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC27Q2M243 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC27Q2M243 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
CCDC27Q2M243 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CCDC27Q2M243 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CCDC27Q2M243 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC18.21■□□□□ 0.5
CCDC27Q2M243 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 HLA-DMA-203ENST00000395305 777 ntBASIC18.2■□□□□ 0.5
CCDC27Q2M243 GUSBP10-201ENST00000417412 665 ntBASIC18.2■□□□□ 0.5
CCDC27Q2M243 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 CHCHD2P9-201ENST00000461726 456 ntBASIC18.2■□□□□ 0.5
CCDC27Q2M243 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 RN7SL767P-201ENST00000493013 295 ntBASIC18.2■□□□□ 0.5
CCDC27Q2M243 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 AP005264.5-201ENST00000590066 467 ntBASIC18.2■□□□□ 0.5
CCDC27Q2M243 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CCDC27Q2M243 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms