Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RAE1P78406 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.35□□□□□ -0.27
RAE1P78406 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.35□□□□□ -0.27
RAE1P78406 AL021707.6-201ENST00000609212 491 ntBASIC13.35□□□□□ -0.27
RAE1P78406 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.35□□□□□ -0.27
RAE1P78406 AC015967.2-201ENST00000624092 234 ntBASIC13.35□□□□□ -0.27
RAE1P78406 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.35□□□□□ -0.27
RAE1P78406 AC006435.4-201ENST00000625037 234 ntBASIC13.35□□□□□ -0.27
RAE1P78406 AL356737.1-201ENST00000634391 234 ntBASIC13.35□□□□□ -0.27
RAE1P78406 AL805961.1-203ENST00000641078 1258 ntBASIC13.35□□□□□ -0.27
RAE1P78406 AL139424.3-202ENST00000641619 917 ntBASIC13.35□□□□□ -0.27
RAE1P78406 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.35□□□□□ -0.27
RAE1P78406 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.35□□□□□ -0.27
RAE1P78406 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
RAE1P78406 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAE1P78406 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAE1P78406 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 AC125807.2-201ENST00000513358 3514 ntBASIC13.35□□□□□ -0.27
RAE1P78406 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 MKRN5P-201ENST00000445263 1467 ntBASIC13.35□□□□□ -0.27
RAE1P78406 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.35□□□□□ -0.27
RAE1P78406 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.35□□□□□ -0.27
RAE1P78406 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.35□□□□□ -0.27
RAE1P78406 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAE1P78406 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.35□□□□□ -0.27
RAE1P78406 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RAE1P78406 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 KRT17P5-201ENST00000332088 839 ntBASIC13.34□□□□□ -0.27
RAE1P78406 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 ACTBP11-201ENST00000436287 1126 ntBASIC13.34□□□□□ -0.27
RAE1P78406 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.34□□□□□ -0.27
RAE1P78406 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.34□□□□□ -0.27
RAE1P78406 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.34□□□□□ -0.27
RAE1P78406 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.34□□□□□ -0.27
RAE1P78406 AL022328.3-201ENST00000607943 679 ntBASIC13.34□□□□□ -0.27
RAE1P78406 AL008721.1-201ENST00000609964 604 ntBASIC13.34□□□□□ -0.27
RAE1P78406 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
RAE1P78406 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.34□□□□□ -0.27
RAE1P78406 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAE1P78406 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.34□□□□□ -0.27
RAE1P78406 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAE1P78406 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.33□□□□□ -0.27
RAE1P78406 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.33□□□□□ -0.27
RAE1P78406 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.33□□□□□ -0.27
RAE1P78406 PCDHA6-201ENST00000378126 3267 ntBASIC13.33□□□□□ -0.27
RAE1P78406 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.33□□□□□ -0.27
RAE1P78406 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
RAE1P78406 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
RAE1P78406 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms