Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KNTC1P50748 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 MIR1307-201ENST00000408840 149 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 ZNF877P-201ENST00000437614 612 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC13.37□□□□□ -0.27
KNTC1P50748 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 KRT8P34-201ENST00000577607 1044 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 AP005264.5-201ENST00000590066 467 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 GGNBP1-204ENST00000613113 887 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.37□□□□□ -0.27
KNTC1P50748 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
KNTC1P50748 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
KNTC1P50748 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.37□□□□□ -0.27
KNTC1P50748 OR2I1P-209ENST00000641730 5365 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.37□□□□□ -0.27
KNTC1P50748 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 FAM226B-201ENST00000602508 1490 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
KNTC1P50748 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.37□□□□□ -0.27
KNTC1P50748 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.37□□□□□ -0.27
KNTC1P50748 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.37□□□□□ -0.27
KNTC1P50748 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC13.37□□□□□ -0.27
KNTC1P50748 AC233280.19-201ENST00000633223 136 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.37□□□□□ -0.27
KNTC1P50748 MYADML-201ENST00000474610 2147 ntBASIC13.37□□□□□ -0.27
KNTC1P50748 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
KNTC1P50748 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KNTC1P50748 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KNTC1P50748 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.36□□□□□ -0.27
KNTC1P50748 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC13.36□□□□□ -0.27
KNTC1P50748 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.36□□□□□ -0.27
KNTC1P50748 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC13.36□□□□□ -0.27
KNTC1P50748 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 OR3A1-202ENST00000615105 966 ntBASIC13.36□□□□□ -0.27
KNTC1P50748 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.36□□□□□ -0.27
KNTC1P50748 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.36□□□□□ -0.27
KNTC1P50748 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
KNTC1P50748 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KNTC1P50748 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms