Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC9.61□□□□□ -0.87
CXCL5P42830 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CXCL5P42830 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC9.61□□□□□ -0.87
CXCL5P42830 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CXCL5P42830 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CXCL5P42830 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CXCL5P42830 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC9.61□□□□□ -0.87
CXCL5P42830 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CXCL5P42830 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CXCL5P42830 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
CXCL5P42830 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
CXCL5P42830 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC9.61□□□□□ -0.87
CXCL5P42830 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
CXCL5P42830 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CXCL5P42830 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 ABCD1P2-201ENST00000429313 1601 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 AL590824.1-201ENST00000403828 1349 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 PCDHB17P-202ENST00000623466 3066 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 AC020910.5-201ENST00000623668 1865 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CXCL5P42830 CICP1-201ENST00000416803 2410 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 TPM3P8-201ENST00000330554 643 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 PNMT-202ENST00000394246 821 ntTSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 PON3-203ENST00000427422 894 ntTSL 3 BASIC9.6□□□□□ -0.87
CXCL5P42830 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 HNRNPA1P13-201ENST00000510646 963 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC9.6□□□□□ -0.87
CXCL5P42830 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 DUX4L27-201ENST00000554796 1261 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC9.6□□□□□ -0.87
CXCL5P42830 AC021016.3-201ENST00000608367 477 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 MIR8072-201ENST00000614241 80 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 FAM90A11P-201ENST00000518378 2218 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 AL358781.1-202ENST00000321081 1360 ntBASIC9.6□□□□□ -0.87
CXCL5P42830 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC9.6□□□□□ -0.87
CXCL5P42830 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
CXCL5P42830 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CXCL5P42830 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CXCL5P42830 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CXCL5P42830 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
CXCL5P42830 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC9.59□□□□□ -0.87
CXCL5P42830 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CXCL5P42830 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC9.59□□□□□ -0.87
CXCL5P42830 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CXCL5P42830 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms