Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 AL356585.2-201ENST00000625078 2396 ntBASIC11.6□□□□□ -0.55
CEACAM3P40198 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.6□□□□□ -0.55
CEACAM3P40198 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
CEACAM3P40198 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CEACAM3P40198 FNTAP2-201ENST00000430308 634 ntBASIC11.6□□□□□ -0.55
CEACAM3P40198 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 GOLGA2P8-201ENST00000505201 779 ntBASIC11.6□□□□□ -0.55
CEACAM3P40198 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC11.6□□□□□ -0.55
CEACAM3P40198 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC11.6□□□□□ -0.55
CEACAM3P40198 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 CICP8-201ENST00000455800 2813 ntBASIC11.6□□□□□ -0.55
CEACAM3P40198 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.59□□□□□ -0.55
CEACAM3P40198 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.59□□□□□ -0.55
CEACAM3P40198 AC090643.2-201ENST00000623442 2029 ntBASIC11.59□□□□□ -0.55
CEACAM3P40198 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 LINC01230-201ENST00000625222 3017 ntBASIC11.59□□□□□ -0.55
CEACAM3P40198 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.59□□□□□ -0.55
CEACAM3P40198 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC11.59□□□□□ -0.55
CEACAM3P40198 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 CALR4P-201ENST00000431943 946 ntBASIC11.59□□□□□ -0.55
CEACAM3P40198 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.59□□□□□ -0.55
CEACAM3P40198 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC11.59□□□□□ -0.55
CEACAM3P40198 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.59□□□□□ -0.55
CEACAM3P40198 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC11.59□□□□□ -0.55
CEACAM3P40198 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.59□□□□□ -0.55
CEACAM3P40198 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 MIR3615-201ENST00000581999 87 ntBASIC11.59□□□□□ -0.55
CEACAM3P40198 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.59□□□□□ -0.55
CEACAM3P40198 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.59□□□□□ -0.55
CEACAM3P40198 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms