Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 KRT8P24-201ENST00000560290 1559 ntBASIC17.56■□□□□ 0.4
COL15A1P39059 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 Z98885.3-201ENST00000624882 1757 ntBASIC17.56■□□□□ 0.4
COL15A1P39059 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.56■□□□□ 0.4
COL15A1P39059 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL15A1P39059 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.55■□□□□ 0.4
COL15A1P39059 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.55■□□□□ 0.4
COL15A1P39059 AC092612.1-201ENST00000514501 998 ntBASIC17.55■□□□□ 0.4
COL15A1P39059 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.55■□□□□ 0.4
COL15A1P39059 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.55■□□□□ 0.4
COL15A1P39059 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.55■□□□□ 0.4
COL15A1P39059 MIR4746-201ENST00000579802 71 ntBASIC17.55■□□□□ 0.4
COL15A1P39059 RN7SL121P-201ENST00000584223 273 ntBASIC17.55■□□□□ 0.4
COL15A1P39059 CASP16P-204ENST00000635032 809 ntBASIC17.55■□□□□ 0.4
COL15A1P39059 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COL15A1P39059 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.55■□□□□ 0.4
COL15A1P39059 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COL15A1P39059 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.55■□□□□ 0.4
COL15A1P39059 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.55■□□□□ 0.4
COL15A1P39059 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.55■□□□□ 0.4
COL15A1P39059 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL15A1P39059 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COL15A1P39059 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL15A1P39059 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC17.54■□□□□ 0.4
COL15A1P39059 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC17.54■□□□□ 0.4
COL15A1P39059 AC027612.2-202ENST00000445955 1199 ntBASIC17.54■□□□□ 0.4
COL15A1P39059 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 AC023906.1-201ENST00000486386 453 ntBASIC17.54■□□□□ 0.4
COL15A1P39059 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.54■□□□□ 0.4
COL15A1P39059 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.54■□□□□ 0.4
COL15A1P39059 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.54■□□□□ 0.4
COL15A1P39059 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.54■□□□□ 0.4
COL15A1P39059 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.54■□□□□ 0.4
COL15A1P39059 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 ANKRD26P1-203ENST00000569528 966 ntBASIC17.54■□□□□ 0.4
COL15A1P39059 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC17.54■□□□□ 0.4
COL15A1P39059 AC026120.2-201ENST00000617239 309 ntBASIC17.54■□□□□ 0.4
COL15A1P39059 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.54■□□□□ 0.4
COL15A1P39059 AC015656.1-201ENST00000624209 3578 ntBASIC17.54■□□□□ 0.4
COL15A1P39059 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL15A1P39059 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL15A1P39059 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL15A1P39059 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.54■□□□□ 0.4
COL15A1P39059 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
COL15A1P39059 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL15A1P39059 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.54■□□□□ 0.4
COL15A1P39059 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL15A1P39059 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL15A1P39059 SNORA57-201ENST00000383870 149 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 RPSAP12-201ENST00000435879 888 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.53■□□□□ 0.4
COL15A1P39059 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC17.53■□□□□ 0.4
COL15A1P39059 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.53■□□□□ 0.4
COL15A1P39059 AC079414.2-201ENST00000567157 1104 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 PRMT1P1-201ENST00000604252 1009 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 KF455155.1-201ENST00000604493 303 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.53■□□□□ 0.4
COL15A1P39059 CSTP2-201ENST00000610599 398 ntBASIC17.53■□□□□ 0.4
COL15A1P39059 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms