Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 AL359845.1-201ENST00000458202 1648 ntBASIC16.3■□□□□ 0.2
CDC27P30260 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 TBC1D27-202ENST00000424239 1573 ntBASIC16.3■□□□□ 0.2
CDC27P30260 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDC27P30260 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.3■□□□□ 0.2
CDC27P30260 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 AC004623.1-201ENST00000624592 2127 ntBASIC16.3■□□□□ 0.2
CDC27P30260 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDC27P30260 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CDC27P30260 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.3■□□□□ 0.2
CDC27P30260 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 AL133466.1-201ENST00000447582 150 ntBASIC16.3■□□□□ 0.2
CDC27P30260 CEP164P1-201ENST00000455142 418 ntBASIC16.3■□□□□ 0.2
CDC27P30260 NDUFS6P1-201ENST00000485187 316 ntBASIC16.3■□□□□ 0.2
CDC27P30260 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.3■□□□□ 0.2
CDC27P30260 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDC27P30260 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.3■□□□□ 0.2
CDC27P30260 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CDC27P30260 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC27P30260 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CDC27P30260 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC27P30260 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC27P30260 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 AC004554.1-201ENST00000422830 1468 ntBASIC16.29■□□□□ 0.2
CDC27P30260 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC27P30260 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDC27P30260 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC27P30260 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC27P30260 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC27P30260 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC27P30260 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDC27P30260 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC27P30260 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC27P30260 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 BCYRN1-201ENST00000418539 200 ntBASIC16.29■□□□□ 0.2
CDC27P30260 AC007274.2-201ENST00000421675 662 ntBASIC16.29■□□□□ 0.2
CDC27P30260 FTH1P22-201ENST00000456305 520 ntBASIC16.29■□□□□ 0.2
CDC27P30260 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC27P30260 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDC27P30260 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC27P30260 RPL18AP8-201ENST00000486071 528 ntBASIC16.29■□□□□ 0.2
CDC27P30260 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.29■□□□□ 0.2
CDC27P30260 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC27P30260 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 AC006453.1-201ENST00000636037 1257 ntBASIC16.29■□□□□ 0.2
CDC27P30260 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC16.29■□□□□ 0.2
CDC27P30260 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC27P30260 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 AC138761.6-201ENST00000583997 1423 ntBASIC16.28■□□□□ 0.2
CDC27P30260 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC27P30260 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC27P30260 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms