Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 AC087386.2-201ENST00000623212 4637 ntBASIC12.12□□□□□ -0.47
CCL1P22362 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 AC115284.2-201ENST00000624646 2054 ntBASIC12.12□□□□□ -0.47
CCL1P22362 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CCL1P22362 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 RPS9P1-201ENST00000419943 583 ntBASIC12.12□□□□□ -0.47
CCL1P22362 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 AL591846.1-201ENST00000451736 433 ntBASIC12.12□□□□□ -0.47
CCL1P22362 AC104073.2-201ENST00000453737 312 ntBASIC12.12□□□□□ -0.47
CCL1P22362 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 RN7SL530P-201ENST00000485097 298 ntBASIC12.12□□□□□ -0.47
CCL1P22362 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.12□□□□□ -0.47
CCL1P22362 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.12□□□□□ -0.47
CCL1P22362 AC005695.3-201ENST00000614522 232 ntBASIC12.12□□□□□ -0.47
CCL1P22362 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 AF013593.1-201ENST00000458074 1487 ntBASIC12.12□□□□□ -0.47
CCL1P22362 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL1P22362 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CCL1P22362 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL1P22362 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCL1P22362 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.11□□□□□ -0.47
CCL1P22362 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
CCL1P22362 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL1P22362 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
CCL1P22362 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.11□□□□□ -0.47
CCL1P22362 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 AC004554.1-201ENST00000422830 1468 ntBASIC12.11□□□□□ -0.47
CCL1P22362 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.11□□□□□ -0.47
CCL1P22362 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CCL1P22362 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.11□□□□□ -0.47
CCL1P22362 AC006987.1-201ENST00000413610 527 ntBASIC12.11□□□□□ -0.47
CCL1P22362 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCL1P22362 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms