Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PGAM1P5-201ENST00000548011 764 ntBASIC13.96□□□□□ -0.17
CDH3P22223 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CDH3P22223 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH3P22223 SORD2P-201ENST00000558556 1069 ntBASIC13.96□□□□□ -0.17
CDH3P22223 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.96□□□□□ -0.17
CDH3P22223 AC005586.2-201ENST00000563946 837 ntBASIC13.96□□□□□ -0.17
CDH3P22223 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.96□□□□□ -0.17
CDH3P22223 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.96□□□□□ -0.17
CDH3P22223 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDH3P22223 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH3P22223 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.96□□□□□ -0.17
CDH3P22223 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDH3P22223 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.96□□□□□ -0.17
CDH3P22223 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.96□□□□□ -0.18
CDH3P22223 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CDH3P22223 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH3P22223 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDH3P22223 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.96□□□□□ -0.18
CDH3P22223 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH3P22223 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CDH3P22223 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDH3P22223 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.96□□□□□ -0.18
CDH3P22223 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH3P22223 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CDH3P22223 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH3P22223 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CDH3P22223 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDH3P22223 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 AC215219.1-201ENST00000400706 1817 ntBASIC13.95□□□□□ -0.18
CDH3P22223 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH3P22223 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH3P22223 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 ST13P19-201ENST00000442505 1124 ntBASIC13.95□□□□□ -0.18
CDH3P22223 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH3P22223 POU5F1P2-201ENST00000521750 823 ntBASIC13.95□□□□□ -0.18
CDH3P22223 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH3P22223 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH3P22223 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH3P22223 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH3P22223 AL606495.2-201ENST00000605867 535 ntBASIC13.95□□□□□ -0.18
CDH3P22223 AC097724.1-201ENST00000609581 426 ntBASIC13.95□□□□□ -0.18
CDH3P22223 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH3P22223 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH3P22223 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH3P22223 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDH3P22223 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 AC113367.3-201ENST00000508316 1912 ntBASIC13.94□□□□□ -0.18
CDH3P22223 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.94□□□□□ -0.18
CDH3P22223 TSPY25P-201ENST00000429463 745 ntBASIC13.94□□□□□ -0.18
CDH3P22223 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 OR2R1P-201ENST00000441404 914 ntBASIC13.94□□□□□ -0.18
CDH3P22223 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 AL353637.1-201ENST00000451571 732 ntBASIC13.94□□□□□ -0.18
CDH3P22223 TPT1P11-201ENST00000458482 498 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms