Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.05□□□□□ -0.48
BCL3P20749 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BCL3P20749 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BCL3P20749 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.05□□□□□ -0.48
BCL3P20749 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BCL3P20749 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BCL3P20749 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.05□□□□□ -0.48
BCL3P20749 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.05□□□□□ -0.48
BCL3P20749 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
BCL3P20749 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 MIR663B-201ENST00000408361 115 ntBASIC12.04□□□□□ -0.48
BCL3P20749 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.04□□□□□ -0.48
BCL3P20749 POM121L10P-201ENST00000436994 1285 ntBASIC12.04□□□□□ -0.48
BCL3P20749 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.04□□□□□ -0.48
BCL3P20749 RNA5SP412-201ENST00000516234 123 ntBASIC12.04□□□□□ -0.48
BCL3P20749 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.04□□□□□ -0.48
BCL3P20749 BNIP3P13-201ENST00000599968 566 ntBASIC12.04□□□□□ -0.48
BCL3P20749 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 MIR193BHG-211ENST00000641433 5365 ntBASIC12.04□□□□□ -0.48
BCL3P20749 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 SHMT1P1-201ENST00000419974 1312 ntBASIC12.04□□□□□ -0.48
BCL3P20749 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.04□□□□□ -0.48
BCL3P20749 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
BCL3P20749 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BCL3P20749 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
BCL3P20749 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.03□□□□□ -0.48
BCL3P20749 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.03□□□□□ -0.48
BCL3P20749 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.03□□□□□ -0.48
BCL3P20749 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.03□□□□□ -0.48
BCL3P20749 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
BCL3P20749 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
BCL3P20749 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.03□□□□□ -0.48
BCL3P20749 AL445209.1-201ENST00000607269 3491 ntBASIC12.03□□□□□ -0.48
BCL3P20749 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.03□□□□□ -0.48
BCL3P20749 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
BCL3P20749 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
BCL3P20749 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BCL3P20749 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BCL3P20749 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms