Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 AC067931.2-201ENST00000623655 2003 ntBASIC14.37□□□□□ -0.11
NFKB1P19838 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 AC015909.3-201ENST00000572855 1794 ntBASIC14.37□□□□□ -0.11
NFKB1P19838 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NFKB1P19838 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.36□□□□□ -0.11
NFKB1P19838 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 AL157791.1-201ENST00000553667 1699 ntBASIC14.36□□□□□ -0.11
NFKB1P19838 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 AC008620.2-201ENST00000510294 1569 ntBASIC14.36□□□□□ -0.11
NFKB1P19838 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.36□□□□□ -0.11
NFKB1P19838 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.36□□□□□ -0.11
NFKB1P19838 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NFKB1P19838 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.36□□□□□ -0.11
NFKB1P19838 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.36□□□□□ -0.11
NFKB1P19838 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.36□□□□□ -0.11
NFKB1P19838 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.36□□□□□ -0.11
NFKB1P19838 FMO6P-201ENST00000236166 1620 ntBASIC14.36□□□□□ -0.11
NFKB1P19838 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
NFKB1P19838 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.36□□□□□ -0.11
NFKB1P19838 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NFKB1P19838 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NFKB1P19838 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 FRMPD2B-201ENST00000431305 1347 ntBASIC14.36□□□□□ -0.11
NFKB1P19838 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NFKB1P19838 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NFKB1P19838 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 AC079781.5-202ENST00000641784 3743 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NFKB1P19838 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 AC239868.1-201ENST00000369385 493 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.35□□□□□ -0.11
NFKB1P19838 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
NFKB1P19838 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.35□□□□□ -0.11
NFKB1P19838 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.35□□□□□ -0.11
NFKB1P19838 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NFKB1P19838 AC116345.2-201ENST00000512837 523 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 AC005740.1-201ENST00000515639 522 ntBASIC14.35□□□□□ -0.11
NFKB1P19838 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms