Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ATF1P18846 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.44□□□□□ -0.42
ATF1P18846 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 AC006001.1-201ENST00000325130 474 ntBASIC12.44□□□□□ -0.42
ATF1P18846 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 TTTY23B-201ENST00000442790 549 ntBASIC12.44□□□□□ -0.42
ATF1P18846 AL355994.2-201ENST00000447882 704 ntBASIC12.44□□□□□ -0.42
ATF1P18846 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.44□□□□□ -0.42
ATF1P18846 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.44□□□□□ -0.42
ATF1P18846 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 KRT90P-201ENST00000549264 1064 ntBASIC12.44□□□□□ -0.42
ATF1P18846 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ATF1P18846 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.44□□□□□ -0.42
ATF1P18846 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 AL355385.1-201ENST00000606123 409 ntBASIC12.44□□□□□ -0.42
ATF1P18846 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 AC025048.6-201ENST00000634326 1161 ntBASIC12.44□□□□□ -0.42
ATF1P18846 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 SHC1P1-201ENST00000425230 1745 ntBASIC12.44□□□□□ -0.42
ATF1P18846 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.44□□□□□ -0.42
ATF1P18846 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ATF1P18846 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ATF1P18846 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 MIR326-201ENST00000362220 95 ntBASIC12.43□□□□□ -0.42
ATF1P18846 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 MIR1202-201ENST00000408529 83 ntBASIC12.43□□□□□ -0.42
ATF1P18846 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.43□□□□□ -0.42
ATF1P18846 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.43□□□□□ -0.42
ATF1P18846 CHMP1AP1-201ENST00000445563 662 ntBASIC12.43□□□□□ -0.42
ATF1P18846 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.43□□□□□ -0.42
ATF1P18846 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.43□□□□□ -0.42
ATF1P18846 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 PPY2P-201ENST00000582808 702 ntBASIC12.43□□□□□ -0.42
ATF1P18846 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ATF1P18846 AC073862.5-201ENST00000624129 2027 ntBASIC12.43□□□□□ -0.42
ATF1P18846 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.43□□□□□ -0.42
ATF1P18846 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 AL645937.6-201ENST00000641122 3727 ntBASIC12.43□□□□□ -0.42
ATF1P18846 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms