Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL2P13500 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.34□□□□□ -0.43
CCL2P13500 MIR6769A-201ENST00000617340 73 ntBASIC12.34□□□□□ -0.43
CCL2P13500 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.34□□□□□ -0.43
CCL2P13500 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.34□□□□□ -0.43
CCL2P13500 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL2P13500 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL2P13500 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL2P13500 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL2P13500 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL2P13500 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL2P13500 AC067931.2-201ENST00000623655 2003 ntBASIC12.33□□□□□ -0.43
CCL2P13500 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CCL2P13500 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.43
CCL2P13500 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL2P13500 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCL2P13500 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL2P13500 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL2P13500 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.33□□□□□ -0.44
CCL2P13500 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 AC103592.1-201ENST00000394513 664 ntBASIC12.33□□□□□ -0.44
CCL2P13500 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL2P13500 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 IGHJ2P-201ENST00000454480 60 ntBASIC12.33□□□□□ -0.44
CCL2P13500 KRT18P15-201ENST00000458108 1291 ntBASIC12.33□□□□□ -0.44
CCL2P13500 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
CCL2P13500 NUP210P1-202ENST00000504322 710 ntBASIC12.33□□□□□ -0.44
CCL2P13500 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL2P13500 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.33□□□□□ -0.44
CCL2P13500 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL2P13500 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL2P13500 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL2P13500 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CCL2P13500 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 AC023794.5-201ENST00000564380 2157 ntBASIC12.33□□□□□ -0.44
CCL2P13500 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL2P13500 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL2P13500 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms