Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.54□□□□□ -0.56
CGB3P0DN86 AC136604.1-202ENST00000425471 771 ntBASIC11.54□□□□□ -0.56
CGB3P0DN86 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC11.54□□□□□ -0.56
CGB3P0DN86 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.54□□□□□ -0.56
CGB3P0DN86 AC006335.1-201ENST00000445200 547 ntBASIC11.54□□□□□ -0.56
CGB3P0DN86 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 AC073150.1-201ENST00000450406 1084 ntBASIC11.54□□□□□ -0.56
CGB3P0DN86 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CGB3P0DN86 AC026803.1-201ENST00000569130 274 ntBASIC11.54□□□□□ -0.56
CGB3P0DN86 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CGB3P0DN86 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC11.54□□□□□ -0.56
CGB3P0DN86 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC11.54□□□□□ -0.56
CGB3P0DN86 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.54□□□□□ -0.56
CGB3P0DN86 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CGB3P0DN86 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CGB3P0DN86 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CGB3P0DN86 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CGB3P0DN86 AL133338.1-201ENST00000565695 1517 ntBASIC11.54□□□□□ -0.56
CGB3P0DN86 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CGB3P0DN86 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 AC008132.1-202ENST00000342005 1389 ntBASIC11.54□□□□□ -0.56
CGB3P0DN86 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
CGB3P0DN86 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CGB3P0DN86 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AL355102.3-201ENST00000554299 1678 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AF013593.1-201ENST00000458074 1487 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 MSNP1-201ENST00000511640 1732 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CGB3P0DN86 MIR645-201ENST00000385283 94 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 DEF8-202ENST00000418391 852 ntTSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC11.53□□□□□ -0.56
CGB3P0DN86 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 RN7SL258P-201ENST00000478664 300 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11.53□□□□□ -0.56
CGB3P0DN86 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.53□□□□□ -0.56
CGB3P0DN86 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 NAT9-211ENST00000580632 799 ntTSL 3 BASIC11.53□□□□□ -0.56
CGB3P0DN86 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC091544.8-201ENST00000619490 361 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 ZNF493-208ENST00000599461 1769 ntBASIC11.53□□□□□ -0.56
CGB3P0DN86 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CGB3P0DN86 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CGB3P0DN86 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms