Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SNORA50.1-201ENST00000628590 135 ntBASIC12.01□□□□□ -0.49
CD3DP04234 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CD3DP04234 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CD3DP04234 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 AC012531.1-201ENST00000562848 2680 ntBASIC12.01□□□□□ -0.49
CD3DP04234 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12□□□□□ -0.49
CD3DP04234 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CD3DP04234 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12□□□□□ -0.49
CD3DP04234 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 SON-203ENST00000381679 7860 ntTSL 5 BASIC12□□□□□ -0.49
CD3DP04234 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CD3DP04234 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CD3DP04234 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 BX842568.4-201ENST00000421222 227 ntBASIC12□□□□□ -0.49
CD3DP04234 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12□□□□□ -0.49
CD3DP04234 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12□□□□□ -0.49
CD3DP04234 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12□□□□□ -0.49
CD3DP04234 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12□□□□□ -0.49
CD3DP04234 FAM86GP-201ENST00000448322 971 ntBASIC12□□□□□ -0.49
CD3DP04234 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 AC004890.2-204ENST00000481968 304 ntBASIC12□□□□□ -0.49
CD3DP04234 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12□□□□□ -0.49
CD3DP04234 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 AC055876.2-201ENST00000531834 546 ntBASIC12□□□□□ -0.49
CD3DP04234 ENPP7P5-201ENST00000541031 1031 ntBASIC12□□□□□ -0.49
CD3DP04234 AL512310.5-201ENST00000551999 515 ntBASIC12□□□□□ -0.49
CD3DP04234 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12□□□□□ -0.49
CD3DP04234 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12□□□□□ -0.49
CD3DP04234 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12□□□□□ -0.49
CD3DP04234 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12□□□□□ -0.49
CD3DP04234 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CD3DP04234 AC093726.1-201ENST00000608064 963 ntBASIC12□□□□□ -0.49
CD3DP04234 AC099568.2-201ENST00000609194 695 ntBASIC12□□□□□ -0.49
CD3DP04234 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12□□□□□ -0.49
CD3DP04234 AL390754.1-201ENST00000619088 582 ntBASIC12□□□□□ -0.49
CD3DP04234 AC027601.3-201ENST00000622907 509 ntBASIC12□□□□□ -0.49
CD3DP04234 CSPG4P11-201ENST00000560634 4910 ntBASIC12□□□□□ -0.49
CD3DP04234 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CD3DP04234 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CD3DP04234 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12□□□□□ -0.49
CD3DP04234 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12□□□□□ -0.49
CD3DP04234 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12□□□□□ -0.49
CD3DP04234 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD3DP04234 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12□□□□□ -0.49
CD3DP04234 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
CD3DP04234 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CD3DP04234 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.99□□□□□ -0.49
CD3DP04234 AOC4P-203ENST00000566825 2289 ntBASIC11.99□□□□□ -0.49
CD3DP04234 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD3DP04234 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms