Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.76□□□□□ -0.21
KRT6AP02538 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRT6AP02538 PTPRVP-205ENST00000641549 5067 ntBASIC13.75□□□□□ -0.21
KRT6AP02538 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 PPT1-213ENST00000641319 2388 ntBASIC13.75□□□□□ -0.21
KRT6AP02538 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
KRT6AP02538 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 AC135782.3-201ENST00000562782 2105 ntBASIC13.75□□□□□ -0.21
KRT6AP02538 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.75□□□□□ -0.21
KRT6AP02538 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.75□□□□□ -0.21
KRT6AP02538 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.75□□□□□ -0.21
KRT6AP02538 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.75□□□□□ -0.21
KRT6AP02538 ACA64.2-201ENST00000459014 129 ntBASIC13.75□□□□□ -0.21
KRT6AP02538 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.75□□□□□ -0.21
KRT6AP02538 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.75□□□□□ -0.21
KRT6AP02538 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.75□□□□□ -0.21
KRT6AP02538 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.75□□□□□ -0.21
KRT6AP02538 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KRT6AP02538 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
KRT6AP02538 AL023803.2-201ENST00000620080 638 ntBASIC13.75□□□□□ -0.21
KRT6AP02538 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 AC018629.1-201ENST00000623381 1736 ntBASIC13.75□□□□□ -0.21
KRT6AP02538 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.75□□□□□ -0.21
KRT6AP02538 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.75□□□□□ -0.21
KRT6AP02538 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRT6AP02538 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.74□□□□□ -0.21
KRT6AP02538 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.74□□□□□ -0.21
KRT6AP02538 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.74□□□□□ -0.21
KRT6AP02538 KRT8P29-201ENST00000420409 1371 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KRT6AP02538 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.74□□□□□ -0.21
KRT6AP02538 AC079776.1-201ENST00000401540 1152 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 AC099336.1-201ENST00000417053 1171 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.74□□□□□ -0.21
KRT6AP02538 AC092580.1-201ENST00000433998 658 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 XBP1P1-201ENST00000436573 652 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 MTX1P1-201ENST00000440904 838 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.74□□□□□ -0.21
KRT6AP02538 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 AP005482.1-201ENST00000563722 1273 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
KRT6AP02538 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.74□□□□□ -0.21
KRT6AP02538 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.74□□□□□ -0.21
KRT6AP02538 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.74□□□□□ -0.21
KRT6AP02538 MIR6775-201ENST00000617557 69 ntBASIC13.74□□□□□ -0.21
KRT6AP02538 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.74□□□□□ -0.21
KRT6AP02538 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms