Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 COL6A4P2-202ENST00000504443 2753 ntBASIC14.25□□□□□ -0.13
GPC4O75487 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 AL157996.1-201ENST00000624684 2299 ntBASIC14.25□□□□□ -0.13
GPC4O75487 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 VDAC1P1-201ENST00000439229 848 ntBASIC14.25□□□□□ -0.13
GPC4O75487 RNMTL1P1-201ENST00000454103 560 ntBASIC14.25□□□□□ -0.13
GPC4O75487 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 RPL18P13-201ENST00000478088 569 ntBASIC14.25□□□□□ -0.13
GPC4O75487 HLA-J-204ENST00000495278 958 ntBASIC14.25□□□□□ -0.13
GPC4O75487 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 AC007663.3-201ENST00000609632 465 ntBASIC14.25□□□□□ -0.13
GPC4O75487 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.25□□□□□ -0.13
GPC4O75487 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.25□□□□□ -0.13
GPC4O75487 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.25□□□□□ -0.13
GPC4O75487 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GPC4O75487 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 AC004899.1-201ENST00000424687 1714 ntBASIC14.24□□□□□ -0.13
GPC4O75487 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.24□□□□□ -0.13
GPC4O75487 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.24□□□□□ -0.13
GPC4O75487 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.24□□□□□ -0.13
GPC4O75487 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GPC4O75487 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GPC4O75487 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GPC4O75487 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.24□□□□□ -0.13
GPC4O75487 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.24□□□□□ -0.13
GPC4O75487 ACTBP11-201ENST00000436287 1126 ntBASIC14.24□□□□□ -0.13
GPC4O75487 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.24□□□□□ -0.13
GPC4O75487 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.24□□□□□ -0.13
GPC4O75487 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.24□□□□□ -0.13
GPC4O75487 AC003686.1-201ENST00000550956 1034 ntBASIC14.24□□□□□ -0.13
GPC4O75487 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.24□□□□□ -0.13
GPC4O75487 AC133540.1-201ENST00000620845 1019 ntBASIC14.24□□□□□ -0.13
GPC4O75487 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.24□□□□□ -0.13
GPC4O75487 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.24□□□□□ -0.13
GPC4O75487 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.24□□□□□ -0.13
GPC4O75487 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GPC4O75487 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.24□□□□□ -0.13
GPC4O75487 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.24□□□□□ -0.13
GPC4O75487 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms