Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AL136309.1-201ENST00000403917 691 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AC010141.1-201ENST00000411585 623 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 ST13P19-201ENST00000442505 1124 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 INGX-202ENST00000489074 768 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AC106760.1-201ENST00000508690 800 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 TDH-203ENST00000531764 1110 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AC025279.2-201ENST00000569730 653 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 MIR5189-201ENST00000577370 114 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 LINC02084-201ENST00000606069 1096 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AL358472.3-201ENST00000608147 415 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 RPSAP52-203ENST00000622976 1023 ntBASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBE2D4Q9Y2X8 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC020917.4-201ENST00000623994 1999 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC131902.2-201ENST00000566892 2172 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AL008718.2-201ENST00000609206 1313 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC103592.1-201ENST00000394513 664 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SNORA50C-201ENST00000408535 133 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 UGT1A2P-201ENST00000454886 866 ntBASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 API5-211ENST00000534695 560 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2D4Q9Y2X8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms