Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 MIR1909-201ENST00000411312 80 ntBASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 ACA64.2-201ENST00000459014 129 ntBASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 AC010328.2-201ENST00000597698 1111 ntBASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
POLR1DQ9Y2S0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
POLR1DQ9Y2S0 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AGAP10P-201ENST00000454844 2418 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 U91328.1-201ENST00000437528 223 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 MTX1P1-201ENST00000440904 838 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AC021723.1-201ENST00000486306 515 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 HILS1-202ENST00000545329 423 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 SNX29P1-201ENST00000548357 1007 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AC124068.2-201ENST00000569473 1109 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AC133540.1-201ENST00000620845 1019 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AL591471.1-201ENST00000621855 229 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms