Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXJ3Q9UPW0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXJ3Q9UPW0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXJ3Q9UPW0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXJ3Q9UPW0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FOXJ3Q9UPW0 LINC00567-201ENST00000569854 3409 ntBASIC12.42□□□□□ -0.42
FOXJ3Q9UPW0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 AL590824.1-201ENST00000403828 1349 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 RCC2P1-201ENST00000452257 1476 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 AC007952.5-201ENST00000572818 1486 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 AL355864.2-201ENST00000447420 863 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 MSNP1-201ENST00000511640 1732 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 GNRHR2-203ENST00000581100 1187 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 RN7SL713P-201ENST00000582127 302 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 MIR4259-201ENST00000584466 101 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 AC060814.4-201ENST00000594169 2163 ntBASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.41□□□□□ -0.42
FOXJ3Q9UPW0 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 AC106760.1-201ENST00000508690 800 ntBASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 SNX29P1-201ENST00000548357 1007 ntBASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.4□□□□□ -0.42
FOXJ3Q9UPW0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms