Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 MKRN5P-201ENST00000445263 1467 ntBASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 RCC2P1-201ENST00000452257 1476 ntBASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 ABCD1P2-201ENST00000429313 1601 ntBASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 AL023775.1-201ENST00000454907 1746 ntBASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 STRCP1-201ENST00000509801 5328 ntBASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THUMPD1Q9NXG2 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 AC125807.2-201ENST00000513358 3514 ntBASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 AL354877.1-201ENST00000424412 413 ntBASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 AC136604.1-202ENST00000425471 771 ntBASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 AC234783.1-201ENST00000441761 496 ntBASIC13.34□□□□□ -0.27
THUMPD1Q9NXG2 TUBB8P8-201ENST00000458717 1058 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms