Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 AC018638.5-201ENST00000450885 754 ntBASIC16.53■□□□□ 0.24
TRIM47Q96LD4 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 NIFKP4-201ENST00000567275 1192 ntBASIC16.53■□□□□ 0.24
TRIM47Q96LD4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM47Q96LD4 AL928921.2-201ENST00000641325 2442 ntBASIC16.53■□□□□ 0.24
TRIM47Q96LD4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.52■□□□□ 0.24
TRIM47Q96LD4 AC108734.2-201ENST00000420887 1069 ntBASIC16.52■□□□□ 0.24
TRIM47Q96LD4 OR8T1P-201ENST00000421347 918 ntBASIC16.52■□□□□ 0.24
TRIM47Q96LD4 ST13P19-201ENST00000442505 1124 ntBASIC16.52■□□□□ 0.24
TRIM47Q96LD4 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.52■□□□□ 0.24
TRIM47Q96LD4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 AC006548.2-201ENST00000605217 529 ntBASIC16.52■□□□□ 0.24
TRIM47Q96LD4 AL139339.2-201ENST00000608063 657 ntBASIC16.52■□□□□ 0.24
TRIM47Q96LD4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM47Q96LD4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
TRIM47Q96LD4 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 TEKT4P2-202ENST00000559466 1312 ntBASIC16.51■□□□□ 0.23
TRIM47Q96LD4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 AC041040.2-201ENST00000622926 2899 ntBASIC16.51■□□□□ 0.23
TRIM47Q96LD4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 PYY2-201ENST00000315776 282 ntBASIC16.51■□□□□ 0.23
TRIM47Q96LD4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM47Q96LD4 MIR566-201ENST00000385187 94 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms