Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 PIN1P1-201ENST00000412108 996 ntBASIC12.61□□□□□ -0.39
RFT1Q96AA3 BAATP1-201ENST00000412284 1225 ntBASIC12.61□□□□□ -0.39
RFT1Q96AA3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 AC103988.2-201ENST00000561804 725 ntBASIC12.61□□□□□ -0.39
RFT1Q96AA3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 AL359845.1-201ENST00000458202 1648 ntBASIC12.61□□□□□ -0.39
RFT1Q96AA3 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AL445250.1-201ENST00000641671 2259 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AC012441.1-201ENST00000446669 685 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 FTLP10-202ENST00000505798 471 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 AC106760.1-201ENST00000508690 800 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 PTP4A1P2-201ENST00000546033 454 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 SORD2P-201ENST00000558556 1069 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AP001002.3-201ENST00000623482 206 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AC060814.4-201ENST00000594169 2163 ntBASIC12.6□□□□□ -0.39
RFT1Q96AA3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFT1Q96AA3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.6□□□□□ -0.39
RFT1Q96AA3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms