Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 LINC00265-2P-201ENST00000413372 782 ntBASIC12.4□□□□□ -0.42
TMEM54Q969K7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 MIR3619-201ENST00000579667 83 ntBASIC12.4□□□□□ -0.42
TMEM54Q969K7 MIR4754-201ENST00000582477 89 ntBASIC12.4□□□□□ -0.42
TMEM54Q969K7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AC020922.3-201ENST00000595064 547 ntBASIC12.4□□□□□ -0.42
TMEM54Q969K7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AP001505.2-201ENST00000616815 443 ntBASIC12.4□□□□□ -0.42
TMEM54Q969K7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TMEM54Q969K7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.4□□□□□ -0.43
TMEM54Q969K7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
TMEM54Q969K7 MARK2P16-201ENST00000605714 1723 ntBASIC12.4□□□□□ -0.43
TMEM54Q969K7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TMEM54Q969K7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 KRT8P18-201ENST00000413425 1445 ntBASIC12.39□□□□□ -0.43
TMEM54Q969K7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 DUTP3-201ENST00000450025 415 ntBASIC12.39□□□□□ -0.43
TMEM54Q969K7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TMEM54Q969K7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.39□□□□□ -0.43
TMEM54Q969K7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms