Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 AC078991.1-201ENST00000437297 610 ntBASIC13.43□□□□□ -0.26
TM9SF4Q92544 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 AP000358.1-201ENST00000456260 156 ntBASIC13.43□□□□□ -0.26
TM9SF4Q92544 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 AP002803.1-201ENST00000528836 498 ntBASIC13.43□□□□□ -0.26
TM9SF4Q92544 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.43□□□□□ -0.26
TM9SF4Q92544 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 RN7SL736P-201ENST00000613111 269 ntBASIC13.43□□□□□ -0.26
TM9SF4Q92544 AP003419.4-201ENST00000616071 517 ntBASIC13.43□□□□□ -0.26
TM9SF4Q92544 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.43□□□□□ -0.26
TM9SF4Q92544 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TM9SF4Q92544 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AL583805.1-201ENST00000391389 531 ntBASIC13.42□□□□□ -0.26
TM9SF4Q92544 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 CHCHD2P9-201ENST00000461726 456 ntBASIC13.42□□□□□ -0.26
TM9SF4Q92544 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 NPM1P43-201ENST00000558669 786 ntBASIC13.42□□□□□ -0.26
TM9SF4Q92544 RN7SL555P-201ENST00000584742 339 ntBASIC13.42□□□□□ -0.26
TM9SF4Q92544 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AC018635.2-201ENST00000608625 364 ntBASIC13.42□□□□□ -0.26
TM9SF4Q92544 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AL136172.1-201ENST00000598590 1394 ntBASIC13.42□□□□□ -0.26
TM9SF4Q92544 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.42□□□□□ -0.26
TM9SF4Q92544 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TM9SF4Q92544 AC018629.1-201ENST00000623381 1736 ntBASIC13.42□□□□□ -0.26
TM9SF4Q92544 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.41□□□□□ -0.26
TM9SF4Q92544 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.41□□□□□ -0.26
TM9SF4Q92544 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
TM9SF4Q92544 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TM9SF4Q92544 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms