Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC107Q8WV48 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 FTLP10-202ENST00000505798 471 ntBASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AL391280.1-201ENST00000506969 1062 ntBASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AC106760.1-201ENST00000508690 800 ntBASIC12.32□□□□□ -0.44
CCDC107Q8WV48 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AC138696.2-201ENST00000607376 223 ntBASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC107Q8WV48 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC107Q8WV48 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms