Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 BX679664.3-201ENST00000414070 555 ntBASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AC113935.1-201ENST00000471722 555 ntBASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 LINC00634-202ENST00000505157 222 ntBASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 MIR5196-201ENST00000578146 115 ntBASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 C8orf49-201ENST00000525043 1968 ntBASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 PPP1R2P4-201ENST00000424051 595 ntBASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 KRT18P66-201ENST00000452970 1269 ntBASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 AC084752.1-201ENST00000509766 622 ntBASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 ALG1L6P-201ENST00000515248 758 ntBASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 KLF17P1-201ENST00000547105 1126 ntBASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 LINC00431-202ENST00000636375 159 ntBASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 AC015802.1-201ENST00000588104 1449 ntBASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHKBP1Q8TBC3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 PPT1-213ENST00000641319 2388 ntBASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 RN7SL564P-201ENST00000496309 250 ntBASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms