Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.67□□□□□ -0.38
LRRC28Q86X40 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC139712.1-201ENST00000378256 1875 ntBASIC12.67□□□□□ -0.38
LRRC28Q86X40 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 AC131902.2-201ENST00000566892 2172 ntBASIC12.66□□□□□ -0.38
LRRC28Q86X40 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 USP17L6P-201ENST00000382470 1197 ntBASIC12.66□□□□□ -0.38
LRRC28Q86X40 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 AK2P2-201ENST00000439142 405 ntBASIC12.66□□□□□ -0.38
LRRC28Q86X40 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 AL583810.1-201ENST00000553344 1045 ntBASIC12.66□□□□□ -0.38
LRRC28Q86X40 DUX4L45-201ENST00000566406 1057 ntBASIC12.66□□□□□ -0.38
LRRC28Q86X40 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRC28Q86X40 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 MIR193BHG-211ENST00000641433 5365 ntBASIC12.66□□□□□ -0.38
LRRC28Q86X40 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LRRC28Q86X40 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.65□□□□□ -0.38
LRRC28Q86X40 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms