Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AL139385.1-201ENST00000611744 3272 ntBASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 FAM90A2P-201ENST00000511144 1395 ntBASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 FAM90A25P-201ENST00000528404 1395 ntBASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 KRT17P5-201ENST00000332088 839 ntBASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 OR8T1P-201ENST00000421347 918 ntBASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 RPSAP15-201ENST00000448168 861 ntBASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFWD3Q6PCD5 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 LINC00115-201ENST00000473798 1317 ntBASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.77□□□□□ -0.04
RFWD3Q6PCD5 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 EEF1DP6-201ENST00000449232 372 ntBASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 MIR3677-201ENST00000578964 60 ntBASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 AC016629.1-201ENST00000596579 586 ntBASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RFWD3Q6PCD5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms