Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 AC008806.1-201ENST00000624962 2443 ntBASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 DDX12P-201ENST00000432996 2947 ntBASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 POM121L8P-201ENST00000417732 1281 ntBASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 POM121L9P-203ENST00000441984 1285 ntBASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 KRT17P8-201ENST00000540749 863 ntBASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 AC138466.3-201ENST00000619983 221 ntBASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 FKBP4P6-201ENST00000457486 1332 ntBASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CCT7P1-201ENST00000406551 1611 ntBASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM53Q6P2H8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AL354989.2-201ENST00000435838 1540 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AC026797.1-201ENST00000624837 2869 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 CD8B2-202ENST00000417670 633 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 FAM197Y7-201ENST00000432892 766 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 GPR53P-205ENST00000457298 1084 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 KRT90P-201ENST00000549264 1064 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AC004466.1-201ENST00000599515 1080 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 ECM1P1-201ENST00000604092 1279 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 AC138951.2-201ENST00000623455 1161 ntBASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM53Q6P2H8 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms