Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 AL589987.1-201ENST00000453380 819 ntBASIC13.34□□□□□ -0.27
LPCAT4Q643R3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 RCC2P1-201ENST00000452257 1476 ntBASIC13.34□□□□□ -0.27
LPCAT4Q643R3 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 AL132642.2-201ENST00000623423 1998 ntBASIC13.34□□□□□ -0.27
LPCAT4Q643R3 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 AL358781.1-202ENST00000321081 1360 ntBASIC13.33□□□□□ -0.27
LPCAT4Q643R3 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
LPCAT4Q643R3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AC010536.1-201ENST00000538868 2611 ntBASIC13.33□□□□□ -0.28
LPCAT4Q643R3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 ZNF493-208ENST00000599461 1769 ntBASIC13.33□□□□□ -0.28
LPCAT4Q643R3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AC009093.10-201ENST00000641956 1442 ntBASIC13.33□□□□□ -0.28
LPCAT4Q643R3 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.33□□□□□ -0.28
LPCAT4Q643R3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LPCAT4Q643R3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 USB1-207ENST00000563149 1751 ntTSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms