Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 MIR1227-201ENST00000408484 88 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 HMGA1P1-201ENST00000415560 1062 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 RCC2P8-201ENST00000502779 1035 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 AC020922.3-201ENST00000595064 547 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 AC009084.3-201ENST00000623356 437 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 AC104581.4-201ENST00000623126 3052 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HERC4Q5GLZ8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 AC126335.2-201ENST00000623362 4637 ntBASIC15.83■□□□□ 0.13
HERC4Q5GLZ8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AC130686.1-201ENST00000622936 2466 ntBASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AC103592.1-201ENST00000394513 664 ntBASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AC089987.1-201ENST00000551654 2209 ntBASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 AL031595.1-201ENST00000623969 4709 ntBASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HERC4Q5GLZ8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 CICP4-201ENST00000447359 2812 ntBASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HERC4Q5GLZ8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms