Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CICP24-201ENST00000605464 2705 ntBASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 PPP1R2P10-201ENST00000393023 595 ntBASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 U3.41-201ENST00000408711 219 ntBASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CA5BP1-205ENST00000435806 1064 ntBASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 AC112250.1-201ENST00000504640 745 ntBASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 COG6-212ENST00000630730 186 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO4Q2I0M5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 KHSRPP1-201ENST00000427983 1768 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 KRT18P33-201ENST00000398525 1043 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 DNM1P46-202ENST00000415963 882 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms