Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CMC4P56277 AL807761.2-201ENST00000422849 729 ntBASIC10.53□□□□□ -0.72
CMC4P56277 PPP1R2P4-201ENST00000424051 595 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.53□□□□□ -0.72
CMC4P56277 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.53□□□□□ -0.72
CMC4P56277 RN7SL67P-201ENST00000492147 296 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AC116345.2-201ENST00000512837 523 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AC005740.1-201ENST00000515639 522 ntBASIC10.53□□□□□ -0.72
CMC4P56277 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.53□□□□□ -0.72
CMC4P56277 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC10.53□□□□□ -0.72
CMC4P56277 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC10.53□□□□□ -0.72
CMC4P56277 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.53□□□□□ -0.72
CMC4P56277 AC012044.1-201ENST00000603431 297 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AC007326.1-201ENST00000604539 458 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AC106872.11-201ENST00000605838 421 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AL021707.6-201ENST00000609212 491 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AC015967.2-201ENST00000624092 234 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AC006435.4-201ENST00000625037 234 ntBASIC10.53□□□□□ -0.72
CMC4P56277 AL356737.1-201ENST00000634391 234 ntBASIC10.53□□□□□ -0.72
CMC4P56277 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CMC4P56277 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CMC4P56277 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
CMC4P56277 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
CMC4P56277 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CMC4P56277 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CMC4P56277 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CMC4P56277 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CMC4P56277 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CMC4P56277 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CMC4P56277 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CMC4P56277 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CMC4P56277 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CMC4P56277 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.52□□□□□ -0.72
CMC4P56277 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.52□□□□□ -0.73
CMC4P56277 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
CMC4P56277 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 AC234782.1-201ENST00000451950 919 ntBASIC10.52□□□□□ -0.73
CMC4P56277 IGHJ2P-201ENST00000454480 60 ntBASIC10.52□□□□□ -0.73
CMC4P56277 AC022494.1-201ENST00000466044 728 ntBASIC10.52□□□□□ -0.73
CMC4P56277 RPL18AP8-201ENST00000486071 528 ntBASIC10.52□□□□□ -0.73
CMC4P56277 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.52□□□□□ -0.73
CMC4P56277 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC10.52□□□□□ -0.73
CMC4P56277 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
CMC4P56277 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
CMC4P56277 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
CMC4P56277 SIGLEC22P-201ENST00000599104 714 ntBASIC10.52□□□□□ -0.73
CMC4P56277 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC10.52□□□□□ -0.73
CMC4P56277 SIGLEC18P-201ENST00000602271 909 ntBASIC10.52□□□□□ -0.73
CMC4P56277 AL109837.1-201ENST00000603272 613 ntBASIC10.52□□□□□ -0.73
CMC4P56277 AC009560.1-201ENST00000620208 434 ntBASIC10.52□□□□□ -0.73
CMC4P56277 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms