Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 AC008620.2-201ENST00000510294 1569 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 RN7SKP109-201ENST00000410592 316 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.6□□□□□ -0.39
GFRA1P56159 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 MPRIPP1-201ENST00000452433 1089 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 AC079112.1-201ENST00000454972 939 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.6□□□□□ -0.39
GFRA1P56159 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.6□□□□□ -0.39
GFRA1P56159 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.6□□□□□ -0.39
GFRA1P56159 SNORD3B-1-201ENST00000577988 758 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 RN7SL470P-201ENST00000583069 259 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.6□□□□□ -0.39
GFRA1P56159 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.6□□□□□ -0.39
GFRA1P56159 AC140113.1-201ENST00000603467 169 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 AC005041.3-201ENST00000606287 649 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 AC107464.3-201ENST00000609172 737 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 AL139424.3-202ENST00000641619 917 ntBASIC12.6□□□□□ -0.39
GFRA1P56159 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GFRA1P56159 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.6□□□□□ -0.39
GFRA1P56159 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
GFRA1P56159 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.59□□□□□ -0.39
GFRA1P56159 AC015909.5-201ENST00000624336 2266 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms