Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CACNB3P54284 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 AC020910.6-201ENST00000623084 1459 ntBASIC16.55■□□□□ 0.24
CACNB3P54284 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.55■□□□□ 0.24
CACNB3P54284 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CACNB3P54284 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CACNB3P54284 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.55■□□□□ 0.24
CACNB3P54284 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.55■□□□□ 0.24
CACNB3P54284 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 ACTBP7-201ENST00000418351 1124 ntBASIC16.55■□□□□ 0.24
CACNB3P54284 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.55■□□□□ 0.24
CACNB3P54284 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.55■□□□□ 0.24
CACNB3P54284 GULOP-201ENST00000454030 748 ntBASIC16.55■□□□□ 0.24
CACNB3P54284 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.55■□□□□ 0.24
CACNB3P54284 COQ10BP2-201ENST00000513804 724 ntBASIC16.55■□□□□ 0.24
CACNB3P54284 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.55■□□□□ 0.24
CACNB3P54284 AC087203.1-201ENST00000532111 1181 ntBASIC16.55■□□□□ 0.24
CACNB3P54284 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.55■□□□□ 0.24
CACNB3P54284 AC073869.4-201ENST00000620841 800 ntBASIC16.55■□□□□ 0.24
CACNB3P54284 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CACNB3P54284 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 AL390755.1-201ENST00000623716 2027 ntBASIC16.55■□□□□ 0.24
CACNB3P54284 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.55■□□□□ 0.24
CACNB3P54284 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CACNB3P54284 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CACNB3P54284 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CACNB3P54284 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CACNB3P54284 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNB3P54284 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CACNB3P54284 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 OR10N1P-201ENST00000392758 869 ntBASIC16.54■□□□□ 0.24
CACNB3P54284 AL080243.1-201ENST00000423293 1060 ntBASIC16.54■□□□□ 0.24
CACNB3P54284 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNB3P54284 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNB3P54284 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNB3P54284 RN7SL147P-201ENST00000487345 298 ntBASIC16.54■□□□□ 0.24
CACNB3P54284 AC083801.1-201ENST00000491689 358 ntBASIC16.54■□□□□ 0.24
CACNB3P54284 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.54■□□□□ 0.24
CACNB3P54284 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNB3P54284 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNB3P54284 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNB3P54284 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.54■□□□□ 0.24
CACNB3P54284 AC005274.1-201ENST00000623460 802 ntBASIC16.54■□□□□ 0.24
CACNB3P54284 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNB3P54284 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.54■□□□□ 0.24
CACNB3P54284 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CACNB3P54284 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CACNB3P54284 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.54■□□□□ 0.24
CACNB3P54284 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNB3P54284 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CACNB3P54284 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNB3P54284 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CACNB3P54284 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNB3P54284 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNB3P54284 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CACNB3P54284 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms