Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
UBE2AP49459 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
UBE2AP49459 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC9.07□□□□□ -0.96
UBE2AP49459 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE2AP49459 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
UBE2AP49459 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE2AP49459 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC9.07□□□□□ -0.96
UBE2AP49459 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
UBE2AP49459 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 HARS-202ENST00000415192 1401 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 AC009093.10-201ENST00000641956 1442 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
UBE2AP49459 TP73-213ENST00000604479 1623 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
UBE2AP49459 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
UBE2AP49459 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 LBX2-201ENST00000341396 886 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.06□□□□□ -0.96
UBE2AP49459 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC9.06□□□□□ -0.96
UBE2AP49459 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE2AP49459 AC005586.2-201ENST00000563946 837 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 MIR497HG-202ENST00000572453 3838 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC9.06□□□□□ -0.96
UBE2AP49459 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 AL136301.1-201ENST00000615830 422 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 AC020910.6-201ENST00000623084 1459 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 AC099521.3-201ENST00000624251 2938 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 KHSRPP1-201ENST00000427983 1768 ntBASIC9.06□□□□□ -0.96
UBE2AP49459 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
UBE2AP49459 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
UBE2AP49459 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE2AP49459 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE2AP49459 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
UBE2AP49459 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms